Arbeitsgruppe Genomik

Software

On this page you can find software tools developed in the Genomics working group. Each software package contains executables and documentation of the respective tool(s). Please read the 'readme.html' after downloading and unzipping the packages.

UPDtool

UPDtool is a command-line application for detection of iso- and heterodisomic uniparental disomy.
The latest version of UPDtool can be downloaded here.

Version history:

UPDtool 0.2 (2013-07-16)

  • Improved detection of small UPD regions.
  • Removed Rscript dependency.

UPDtool 0.1

  • Initial version.

ngs-bits

ngs-bits is a collection of tools for short-read data analysis.
Please check the GitHub project at https://github.com/imgag/ngs-bits